Insertion junction: CLIP2.018439_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018439
Chromosome:chromosome 7
Location:2609785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330150 (1 of 7) IPR011335 - Restriction endonuclease type II-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGCCCCTCCTGCCCGCGCACCTGGACACCACCAGGGCGCTCTGGCA
Internal bar code:TGTCGAGGTCTCTGGTGGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2288
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAAAAGTCTCTCCGCCAC
Suggested primer 2:CACGGTATCCTGTCTACGCC