Insertion junction: CLIP2.018441_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018441
Chromosome:chromosome 12
Location:2025395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510550 (1 of 2) PTHR12197//PTHR12197:SF145 - SET AND MYND DOMAIN CONTAINING // SET DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCGAGGCGGGTACAGGGGTGGTGGGTGCGGGTGGAGCGGGGCTGG
Internal bar code:ATATGAGGTTGTGTAGGAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3860
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGCATTGCATTTGTGCA
Suggested primer 2:GCGTGTGTGTACGACCTGTA