Insertion junction: CLIP2.018449_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018449
Chromosome:chromosome 6
Location:2695650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270700 (1 of 1) PTHR10688 - PWWP DOMAIN-CONTAINING PROTEIN 3'UTR
Cre06.g270726 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCTTTCAAGAACCACATCGACCTGCAGCAGGCGGAGCAGGCGGAGCG
Internal bar code:ATTAAGCAATTTGGTTTAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1104
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGGTTGAAGTAGTGGAC
Suggested primer 2:GTTGCGTGTGGGACTCAAAC