Insertion junction: CLIP2.018453_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018453
Chromosome:chromosome 11
Location:1011259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGCAGTGTAAATCTGTTCGGCAGTTCGGCTGTGTGTTCGGTCCCGC
Internal bar code:TGAGTAGTGACTAAAGGAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1938
LEAP-Seq percent confirming:82.8125
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTCGAGGCATGCACGAG
Suggested primer 2:CAAGGAAGAAGAGGCCCCAG