Insertion junction: CLIP2.018462_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018462
Chromosome:chromosome 4
Location:2050036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219250 IFT52,BLD1 Intraflagellar transport protein 52; (1 of 1) PF09822 - ABC-type uncharacterized transport system (ABC_transp_aux) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGCCCCTGCCCCTCCGGCAAGGCACCATCCCGCGCCACAGCCGGCT
Internal bar code:GCACGGTAGTGTCTACCCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1459
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGACGACTCGCTGTTCAA
Suggested primer 2:TCCGATAAAGGCTCCCCTCA