Insertion junction: CLIP2.018466_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018466
Chromosome:chromosome 3
Location:8001366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201850 SRH10 (1 of 2) K10877 - DNA repair and recombination protein RAD54B (RAD54B); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGAGCGGCACCTGCGGCCCGCGCCGGATGCCCAGTGTGCCGCGCTGG
Internal bar code:GTTAGGGTGCAGACTTACCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1582
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGATAATGAGGCGTCGT
Suggested primer 2:GCAATGCACTGCACCATGAA