Insertion junction: CLIP2.018481_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018481
Chromosome:chromosome 1
Location:743087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004124 (1 of 3) 3.2.1.8 - Endo-1,4-beta-xylanase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACTTTCGGCCCATGCGACAGGTCCACGTGGAGCCGCCGTCTGACGAG
Internal bar code:AATGATTCTGGGTGAAATTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4829
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCGCCTCCATCTTATCC
Suggested primer 2:GGCAGGCAAGTAGTTGGGAT