Insertion junction: CLIP2.018491_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018491
Chromosome:chromosome 7
Location:936490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319001 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAAGCAGTTGGCTTGGCGGGCCGCTGCCCACAGCCCCTTGCTTTCGG
Internal bar code:GTAACGGTCCACACTCGCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2172
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGTCTTCGGGTGCGGAT
Suggested primer 2:GTTGCCGCTGATGTGGAATG