Insertion junction: CLIP2.018494_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018494
Chromosome:chromosome 3
Location:6767950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196651 RAD10 DNA repair protein; (1 of 1) K10849 - DNA excision repair protein ERCC-1 (ERCC1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGTCTCCAGCCAGCGGGCGCATTCCTGTGGTGCAGCCAAGAGTAGG
Internal bar code:CAATTCAAATCATTATGCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTCTGCTTTCGGTTTTG
Suggested primer 2:TCCTGAACGGCTCATGGAAC