Insertion junction: CLIP2.018498_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018498
Chromosome:chromosome 17
Location:2624193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716600 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCCCTCACAGCAGCGCTCGCCGGCAATCTCTGCCACGTCCTGCCGG
Internal bar code:ACGTCGTAGCCCATTTCTGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:584
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCCTCCAATCACAAGAT
Suggested primer 2:CTAGTCATGTACGACGCCCC