Insertion junction: CLIP2.018499_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018499
Chromosome:chromosome 17
Location:3432521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723450 FAP13 WD-repeat Flagellar Associated Protein 13; (1 of 1) IPR001680//IPR007111//IPR017986//IPR020472//IPR027417 - WD40 repeat // NACHT nucleoside triphosphatase // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAGGCTGCACACCGCCGATGCCCCGCGTGCTTTGATCAACCACCTCG
Internal bar code:TTAATTGAGACATCAATCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2472
LEAP-Seq percent confirming:82.2222
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGTGAGGGAAGGGCATT
Suggested primer 2:GCGACAAGGCAATTCGGATC