Insertion junction: CLIP2.018510_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018510
Chromosome:chromosome 16
Location:6594267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673950 (1 of 1) 2.6.1.80 - Nicotianamine aminotransferase / Nicotianamine transaminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGGAAGCATCTCAGCAGTGTGCGTGCCTTCTTGCTGTCGCTGCATA
Internal bar code:ACTATAGGTAGCACGGTGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4207
LEAP-Seq percent confirming:98.8889
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTCAGCTCTCACCCAA
Suggested primer 2:CAATGTGGGCTGTGTGTGTG