Insertion junction: CLIP2.018517_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018517
Chromosome:chromosome 16
Location:6257503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676350 (1 of 1) PTHR23073//PTHR23073:SF37 - 26S PROTEASE REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTAATCGCTCAGCAATGCAAGCCACGCCAGAGCCGCGCGCGCAGGGGG
Internal bar code:TGCCAAGTAAGTTTTGTTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAACGCAAGGAGAAGCC
Suggested primer 2:GTGAAACAAACCGAACCCCG