Insertion junction: CLIP2.018518_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018518
Chromosome:chromosome 14
Location:1197646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00189783

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCTTGCACCACAAGGGGAAAGCACACCGAGGCGTTCGGATTTGGAC
Internal bar code:CGGGTTATTGTTAAAGTTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3371
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGAAACAACATGGGGGC
Suggested primer 2:ATCTGGCCCTTAAACCCACG