Insertion junction: CLIP2.018521_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018521
Chromosome:chromosome 9
Location:6668468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416650 Nucleotide-diphospho-sugar transferase; (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGGCGCGAATATGGGCAGCATTTCGCATGAGCTCACCAGCACGGGAA
Internal bar code:AGTCCGATGGCACACAACATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCAATCGAAGCATGGTG
Suggested primer 2:AGCCAGCTCATCCTGACAAC