Insertion junction: CLIP2.018523_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018523
Chromosome:chromosome 3
Location:309920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144484 CDPK10 Calcium/calmodulin-dependent protein kinase; (1 of 4) PTHR24349//PTHR24349:SF121 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGGTAGGCGGGGGCGAGGAGCGGGCGGGCGAGGGTGGGTGCAGGGA
Internal bar code:GTTCGACACTTGTGTGCGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAGGTATGGAGGTTGCC
Suggested primer 2:GTTCAAGAGGTCGGAGGTGG