Insertion junction: CLIP2.018536_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018536
Chromosome:chromosome 2
Location:568343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGGTGAGATGAGCTTGAAACTGAAGCTGTTAGCGGTTCTTGAGCTGC
Internal bar code:CAAAAGGCCTGATATGCTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3775
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTTCTGGTCTTTGCCCT
Suggested primer 2:TACCGGGTGTACAGAGCTGA