Insertion junction: CLIP2.018549_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018549
Chromosome:chromosome 16
Location:2008533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656750 (1 of 2) PTHR12210//PTHR12210:SF70 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // AT02326P-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGAGCAATGACGCAGGCGCGAGGCGAGAGAACCCCGCAGCCGGCAGT
Internal bar code:TGAAATGAATAAGGACTAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2588
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAGAGGAACCCACATGG
Suggested primer 2:AGTGACTCAACTACACGGCG