Insertion junction: CLIP2.018550_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018550
Chromosome:chromosome 17
Location:2499351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715600 (1 of 1) PF11822 - Domain of unknown function (DUF3342) (DUF3342) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGCCGGTGTCAGCGCCGCGACCCAGGCGGTGACGGGACGTGTGCG
Internal bar code:CCAAATGCTTTTACTTGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3721
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCACGCTTTGTTTGTG
Suggested primer 2:TCGTCGAGTTCTGTGTCAGC