Insertion junction: CLIP2.018551_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018551
Chromosome:chromosome 1
Location:5457725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038550 SQD2 Sulfoquinovosyldiacylglycerol synthase; (1 of 2) K06119 - sulfoquinovosyltransferase (SQD2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGCAGTTGTTGATACACTATTTACTGGGCAGCCACACATGACTGCAG
Internal bar code:GGTTGTTCATGAGGGAAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:119
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAGTCCCACGCCCTGTTC
Suggested primer 2:CATGAATGCGAGGGAGTGGT