Insertion junction: CLIP2.018554_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018554
Chromosome:chromosome 6
Location:1019938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256900 SND1C SAND domain-encoding short ORF; (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGCGGGATAACATGGGGATAACATGGTTGTGGCGCGGGTTGGCAAC
Internal bar code:AATGTGAGGAAAACATAGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1626
LEAP-Seq percent confirming:43.4783
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCGCATCAGACAGCTAT
Suggested primer 2:CGACCTTCAGGCTCTGTGTT