Insertion junction: CLIP2.018558_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018558
Chromosome:chromosome 5
Location:485998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244100 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTCCCGGACCGCCGTCAATAGGCAGCCCGGAGCCAGCCGCTGCGAGC
Internal bar code:AGGGTGTTCTTTATTCTCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5122
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTGTCACGTAACTTGA
Suggested primer 2:ACCAATTTGCAGAGCGAGGA