Insertion junction: CLIP2.018560_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018560
Chromosome:chromosome 3
Location:3901070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170700 (1 of 3) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCCAGATGCTCGTGCGCAAGCCGTTGACGCAGTCGCTGGTAGACTCC
Internal bar code:GACGTCGTATCTATTACTTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1613
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTATGTGTGTGGCTCAT
Suggested primer 2:GGACAGGCGACAGAACAAGA