Insertion junction: CLIP2.018564_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018564
Chromosome:chromosome 1
Location:5102426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035600 MSC2 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAATATAGGGTCAGATAGGCGTGCTTCAGCTAAGTACTACGAAGTCAG
Internal bar code:TCAAATCGGAACACTGATTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1472
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGACTGTTAGATCGGGG
Suggested primer 2:ATACTGAAGTACGGCGGCAG