Insertion junction: CLIP2.018579_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018579
Chromosome:chromosome 3
Location:3348530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166201 (1 of 2) PTHR10174//PTHR10174:SF113 - RETINALDEHYDE BINDING PROTEIN-RELATED // RETINALDEHYDE-BINDING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCTGCATCATCCTGTCGAGCAGGTATGCGGGCGTGTGGTGGCGCCC
Internal bar code:GTTGCGCGGGAGAGGGGTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:730
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGAGGGAATGAGGGGGAG
Suggested primer 2:GTGCATGACCCCCACATACA