Insertion junction: CLIP2.018579_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018579
Chromosome:chromosome 3
Location:3348531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166201 (1 of 2) PTHR10174//PTHR10174:SF113 - RETINALDEHYDE BINDING PROTEIN-RELATED // RETINALDEHYDE-BINDING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGATGGGTTGCACGAATCAGGTTGGGCCGTAGGCGCAGAAGGGAGCC
Internal bar code:GGAATCATTAGTTTTGACCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:212
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCATGACCCCCACATACA
Suggested primer 2:TGAGAGGGAATGAGGGGGAG