Insertion junction: CLIP2.018581_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018581
Chromosome:chromosome 5
Location:3484595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800578 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATAACGACAACACCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
Internal bar code:ATTTCCAGAATTTCTTCTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1159
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGCTGCTGTTGCTGTT
Suggested primer 2:CCTCCTCCTCCCCCATACAA