Insertion junction: CLIP2.018581_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018581
Chromosome:chromosome 5
Location:3484604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800578 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTATCGGCGCTGGCGCTGCTGCTGCCGCTGACGACCTGGTGTCCGGT
Internal bar code:ATTTCCAGAATTTCTTCTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTCCTCCCCCATACAA
Suggested primer 2:CTGTTGCTGCTGTTGCTGTT