Insertion junction: CLIP2.018588_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018588
Chromosome:chromosome 3
Location:4483552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175650 (1 of 7) PF00211//PF13416 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCTGCCCGGCATAGCAGTCTCCCATAAGGCCCATCCGAGCCAGCGCG
Internal bar code:TTGACCGGTCATAGTAGCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1713
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCATCCAGGAGGTTGGG
Suggested primer 2:GCAAGGAATCCCCATCCCAA