Insertion junction: CLIP2.018590_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018590
Chromosome:chromosome 3
Location:4245504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173950 (1 of 3) PF08495 - FIST N domain (FIST) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCCTGAGTCACGCGCATGATGGGGCCGGCGCCGCGGAAGCCGGGCG
Internal bar code:TAGGCCTAAAGTTGAAGAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1317
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AACTAAACGGCTGTGCAGGT
Suggested primer 2:TTGAGGGAGGTGGCAAACTC