Insertion junction: CLIP2.018593_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018593
Chromosome:chromosome 5
Location:1334587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241655 (1 of 24) IPR001478 - PDZ domain CDS/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTCGATGTGCATCGCGCGAGGCAAGTTTTGCGGTCATGGACGTGGGG
Internal bar code:TGTTCTCTGTTCATGTTCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACAGGTGTGCAGAGGGG
Suggested primer 2:CCTGCAGGGCCAGAATAACA