Insertion junction: CLIP2.018593_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018593
Chromosome:chromosome 5
Location:1334587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241655 (1 of 24) IPR001478 - PDZ domain CDS/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAATGAGGACTTGTGACAAATAGCAGCGAAGTATTAGCAGTTTTGCCA
Internal bar code:TGTTCTCTGTTCATGTTCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCAGGGCCAGAATAACA
Suggested primer 2:CTAACAGGTGTGCAGAGGGG