Insertion junction: CLIP2.018599_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018599
Chromosome:chromosome 4
Location:2763103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223650 FAP30 (1 of 1) PF02494 - HYR domain (HYR); Flagellar Associated Protein 30 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATTACGCACATGCAAACGCATTCGTGTAATCCCCCCCACCCTGCATG
Internal bar code:GGTATGCATCAGCATTGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2187
LEAP-Seq percent confirming:17.3913
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACGACCACAGCGAATGT
Suggested primer 2:AACACAGCTCCAGACGTCAG