Insertion junction: CLIP2.018605_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018605
Chromosome:chromosome 2
Location:1217266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081700 PHC66 Pherophorin-chlamydomonas homolog 66; (1 of 1) IPR003882//IPR005404//IPR024616 - Pistil-specific extensin-like protein // Potassium channel, voltage dependent, Kv3.3 // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTGGGAGGCTCCGGCGACGGCGGAGGGGCACCGTACACGGGCGGTGG
Internal bar code:GAAGGCCCGTCCAGCGCAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1561
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGTTCGCTTGTATGCA
Suggested primer 2:ATTCCCATTCCCATTGCCGT