Insertion junction: CLIP2.018611_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018611
Chromosome:chromosome 1
Location:6717683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048000 TPM1 Tropomyosin 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCGGCGGAGCTGCAGCGGCTGGCGGCGGAGGCGGCGCTGGGGCCCA
Internal bar code:AGTGGGAGAGGACTACCCACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:657
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCTCCTCGGCTTCGAAG
Suggested primer 2:GCAGTACGGGAATCGCCATA