Insertion junction: CLIP2.018616_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018616
Chromosome:chromosome 5
Location:3184677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232100 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGTGTGCGTTTGTACGAGAGCACGGGACTAAGGGATTGCGCGTGCAA
Internal bar code:TAGGGCTCCATTTCTCTCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1940
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGCATCGACAAGGACA
Suggested primer 2:ATTTCCGACAGCCCCGAATT