Insertion junction: CLIP2.018623_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018623
Chromosome:chromosome 12
Location:5430143
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529550 CALK1,CALK,ALK1 Aurora-like kinase; (1 of 1) PF00069//PF07714//PF14531 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // Kinase-like (Kinase-like) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCACCTGTCTTGACCAGCTGCCGCCGTGCGGGCGCCAGCACACTCTG
Internal bar code:AGCAGAATAGACTTACTCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:915
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTACTTGCACCTGACCCG
Suggested primer 2:CCGAAAGACCCTGAAGCCAT