Insertion junction: CLIP2.018629_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018629
Chromosome:chromosome 9
Location:35306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386119 (1 of 2) PF13383 - Methyltransferase domain (Methyltransf_22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGGAACTTTAATTGGGTCATGCTGCATGGGCAAACAAGGTAAAGGT
Internal bar code:CAAAGGCCATGCCAGCCATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGTGCCTCCTGGTTGG
Suggested primer 2:GCAGCAGACGACGTTTGTTT