Insertion junction: CLIP2.018629_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018629
Chromosome:chromosome 9
Location:35320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386119 (1 of 2) PF13383 - Methyltransferase domain (Methyltransf_22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACCTGACAGGGTCTTTCCAGGTGGGCAGCCCGTGAACTGCGACGTGA
Internal bar code:CCTCATACATGGATAACGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5170
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGACGACGTTTGTTT
Suggested primer 2:CAGTAGTGCCTCCTGGTTGG