Insertion junction: CLIP2.018647_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018647
Chromosome:chromosome 9
Location:3835894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801034 (1 of 1) K08736 - DNA mismatch repair protein MSH3 (MSH3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGGCCGAGTTCGCCACAGACGGGGGGAGCAGGAGGGGGAGGACCCT
Internal bar code:ACGACATCAAGGTCGTGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:745
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATACCAGACCAGGCCAG
Suggested primer 2:TGGGTGTGGGTGTGTGTATG