Insertion junction: CLIP2.018648_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018648
Chromosome:chromosome 6
Location:2854352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272250 PHC27 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTCCCGGCGCCCCATGGCTGACCAAGACTGTGCTACTTTGTACGCGA
Internal bar code:ACTTCTCATAATTTGCATAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2873
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTAGAGCCCTTACTTCG
Suggested primer 2:ACCCCTTGAAGTACATGCGG