Insertion junction: CLIP2.018653_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018653
Chromosome:chromosome 16
Location:7611576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684715 DCL2 Dicer-like protein; (1 of 4) 3.1.26.3 - Ribonuclease III / RNase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACCGTGGAGGTCAGGAGGATGTGGTCCCAGCAAGAGGTCGAGGTCAGC
Internal bar code:TTTCGTTTTAAAGCCCGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1244
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCTCTTTTCCACCGT
Suggested primer 2:GATGGAGGCTCTGATCACCG