Insertion junction: CLIP2.018656_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018656
Chromosome:chromosome 8
Location:4423154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385350 (1 of 5) PTHR32467//PTHR32467:SF15 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTCGGCCGCATCCTTGCTTACAATGGCGCGCTGCATTTCTTTGCAGG
Internal bar code:GGATCCTTCCAAAGGTAACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1561
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTACTGCTGCTGGTAAT
Suggested primer 2:CACATGTCGCATGCATCTGG