Insertion junction: CLIP2.018659_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018659
Chromosome:chromosome 1
Location:742979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004124 (1 of 3) 3.2.1.8 - Endo-1,4-beta-xylanase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTGGATGCTTGTAACACGTAACACTGTTCTGTAGGCACCGTACGCTG
Internal bar code:CTCGTTCACATTCCAAAATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1745
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTACTCTTCTTGGCGCC
Suggested primer 2:GCTCGGCATGACGTTTTACC