Insertion junction: CLIP2.018679_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018679
Chromosome:chromosome 16
Location:7949267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690767 (1 of 3) PF02737 - 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain (3HCDH_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGCCAAGCTCGATATGCACAAATTCGTACCTTCCCCTGATTGGCAGA
Internal bar code:TAGGGATGTGAACAGGTGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:806
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCGTCTCCAAACACCAG
Suggested primer 2:GCTCGAGCTAAGCGTCTGAT