Insertion junction: CLIP2.018684_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018684
Chromosome:chromosome 14
Location:1576491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCAAATTCAAGCATCGCGCGGGAAGCACGAACCGCATTGTGCCGGAG
Internal bar code:GCACGGTACAGTTAATATCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3744
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGTTAGCTCCTGTTGCA
Suggested primer 2:GCAGACACACTGGATGACCA