Insertion junction: CLIP2.018691_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018691
Chromosome:chromosome 12
Location:5675230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531950 (1 of 4) PTHR10217//PTHR10217:SF509 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CNG CHANNEL-LIKE, ISOFORM E CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTCAGCATCAGGGCCCGGCTTGCTGGCAGCGGCGGCGGCGTGCTCCA
Internal bar code:GATCGTCAAGATCTTCTCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAGGGTACGGACTTGCA
Suggested primer 2:CGATGAGAACCGACTGAGCA