Insertion junction: CLIP2.018705_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018705
Chromosome:chromosome 3
Location:443579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGAGGACTGATGGTGTGCACAGGGTTAGGGAGCTAGATGCGGGGACA
Internal bar code:TCGACAGACCATGTTTTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTTTCGCTGTCCAAGAC
Suggested primer 2:GAAAGAAACACGCAGCCAGG