Insertion junction: CLIP2.018712_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018712
Chromosome:chromosome 3
Location:5054498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179961 POLE1,POLE1-1 (1 of 1) K02324 - DNA polymerase epsilon subunit 1 (POLE1); DNA polymerase epsilon subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGACCCACTTCATTGGGCTCGGGCACACAACACCCCTTCCCCCCCAC
Internal bar code:ACATTCAGTTCTAGAGAGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1424
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTACATCGACACGGTGAGGG
Suggested primer 2:GGTGGAGTGTTCAGTCCAGG