Insertion junction: CLIP2.018722_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018722
Chromosome:chromosome 7
Location:3949985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339633 DNJ20 (1 of 2) PTHR24078//PTHR24078:SF257 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGCAGGGCAGCGCCACACACCCACACTGTATACTTGTCTGCCACCA
Internal bar code:TTCTGTGTCCCTTAGTTGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1492
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCTTCACTCCATGTGTG
Suggested primer 2:CCAAACATGCCAAAGCTGCT